Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Rfwd3Q8CIK8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rfwd3Q8CIK8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Rfwd3Q8CIK8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfwd3Q8CIK8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rfwd3Q8CIK8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Rfwd3Q8CIK8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Rfwd3Q8CIK8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Gm42569-201ENSMUST00000200539 472 ntBASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rfwd3Q8CIK8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfwd3Q8CIK8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfwd3Q8CIK8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Rfwd3Q8CIK8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.5■□□□□ 0.39
Rfwd3Q8CIK8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.5■□□□□ 0.39
Rfwd3Q8CIK8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rfwd3Q8CIK8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfwd3Q8CIK8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rfwd3Q8CIK8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfwd3Q8CIK8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rfwd3Q8CIK8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Rfwd3Q8CIK8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rfwd3Q8CIK8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Gm27405-201ENSMUST00000184201 112 ntBASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rfwd3Q8CIK8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfwd3Q8CIK8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfwd3Q8CIK8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.47■□□□□ 0.39
Rfwd3Q8CIK8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.47■□□□□ 0.39
Rfwd3Q8CIK8 Gm7514-201ENSMUST00000209475 934 ntBASIC17.47■□□□□ 0.39
Rfwd3Q8CIK8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfwd3Q8CIK8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfwd3Q8CIK8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfwd3Q8CIK8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rfwd3Q8CIK8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rfwd3Q8CIK8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
Rfwd3Q8CIK8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfwd3Q8CIK8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Rfwd3Q8CIK8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Rfwd3Q8CIK8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfwd3Q8CIK8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms