Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Depdc1aQ8CIG0 Gm44549-201ENSMUST00000208351 577 ntBASIC21.15■□□□□ 0.98
Depdc1aQ8CIG0 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.15■□□□□ 0.98
Depdc1aQ8CIG0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.15■□□□□ 0.98
Depdc1aQ8CIG0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.15■□□□□ 0.98
Depdc1aQ8CIG0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Depdc1aQ8CIG0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Depdc1aQ8CIG0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Depdc1aQ8CIG0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Depdc1aQ8CIG0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Depdc1aQ8CIG0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1aQ8CIG0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1aQ8CIG0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1aQ8CIG0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Depdc1aQ8CIG0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1aQ8CIG0 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1aQ8CIG0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Depdc1aQ8CIG0 Gm27275-201ENSMUST00000184318 272 ntBASIC21.13■□□□□ 0.97
Depdc1aQ8CIG0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1aQ8CIG0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1aQ8CIG0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Depdc1aQ8CIG0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1aQ8CIG0 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.12■□□□□ 0.97
Depdc1aQ8CIG0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1aQ8CIG0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Depdc1aQ8CIG0 Gm12896-201ENSMUST00000118430 226 ntBASIC21.12■□□□□ 0.97
Depdc1aQ8CIG0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1aQ8CIG0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Depdc1aQ8CIG0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1aQ8CIG0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1aQ8CIG0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1aQ8CIG0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Depdc1aQ8CIG0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Trmt13-210ENSMUST00000198454 880 ntBASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Depdc1aQ8CIG0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Depdc1aQ8CIG0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1aQ8CIG0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1aQ8CIG0 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.1■□□□□ 0.97
Depdc1aQ8CIG0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1aQ8CIG0 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1aQ8CIG0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1aQ8CIG0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1aQ8CIG0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Depdc1aQ8CIG0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Depdc1aQ8CIG0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 Gm2559-201ENSMUST00000201323 363 ntBASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 Dio3-201ENSMUST00000097228 1449 ntBASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Depdc1aQ8CIG0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Depdc1aQ8CIG0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Depdc1aQ8CIG0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Depdc1aQ8CIG0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Depdc1aQ8CIG0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC21.08■□□□□ 0.97
Depdc1aQ8CIG0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Depdc1aQ8CIG0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Depdc1aQ8CIG0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
Depdc1aQ8CIG0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Depdc1aQ8CIG0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Depdc1aQ8CIG0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1aQ8CIG0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1aQ8CIG0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1aQ8CIG0 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.07■□□□□ 0.96
Depdc1aQ8CIG0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Depdc1aQ8CIG0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.07■□□□□ 0.96
Depdc1aQ8CIG0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1aQ8CIG0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1aQ8CIG0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1aQ8CIG0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Depdc1aQ8CIG0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.06■□□□□ 0.96
Depdc1aQ8CIG0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Depdc1aQ8CIG0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Depdc1aQ8CIG0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Depdc1aQ8CIG0 Gm8520-201ENSMUST00000186517 868 ntBASIC21.06■□□□□ 0.96
Depdc1aQ8CIG0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Depdc1aQ8CIG0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Depdc1aQ8CIG0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Depdc1aQ8CIG0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Depdc1aQ8CIG0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Depdc1aQ8CIG0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Depdc1aQ8CIG0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Depdc1aQ8CIG0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms