Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox30Q8CGW4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox30Q8CGW4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
Sox30Q8CGW4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.5■□□□□ 0.87
Sox30Q8CGW4 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox30Q8CGW4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sox30Q8CGW4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sox30Q8CGW4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sox30Q8CGW4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sox30Q8CGW4 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.48■□□□□ 0.87
Sox30Q8CGW4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox30Q8CGW4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox30Q8CGW4 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sox30Q8CGW4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Sox30Q8CGW4 Gm21956-201ENSMUST00000179946 522 ntBASIC20.48■□□□□ 0.87
Sox30Q8CGW4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.48■□□□□ 0.87
Sox30Q8CGW4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox30Q8CGW4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox30Q8CGW4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sox30Q8CGW4 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sox30Q8CGW4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.46■□□□□ 0.87
Sox30Q8CGW4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.46■□□□□ 0.87
Sox30Q8CGW4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sox30Q8CGW4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox30Q8CGW4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox30Q8CGW4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Sox30Q8CGW4 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sox30Q8CGW4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sox30Q8CGW4 Mir7075-201ENSMUST00000184187 82 ntBASIC20.45■□□□□ 0.86
Sox30Q8CGW4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sox30Q8CGW4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.45■□□□□ 0.86
Sox30Q8CGW4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Sox30Q8CGW4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Sox30Q8CGW4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Sox30Q8CGW4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox30Q8CGW4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sox30Q8CGW4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.44■□□□□ 0.86
Sox30Q8CGW4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox30Q8CGW4 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.44■□□□□ 0.86
Sox30Q8CGW4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox30Q8CGW4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox30Q8CGW4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox30Q8CGW4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sox30Q8CGW4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sox30Q8CGW4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms