Protein–RNA interactions for Protein: Q8CGF5

Tmem56, Transmembrane protein 56, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem56Q8CGF5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem56Q8CGF5 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem56Q8CGF5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem56Q8CGF5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem56Q8CGF5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem56Q8CGF5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tmem56Q8CGF5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.02■□□□□ 0.16
Tmem56Q8CGF5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Tmem56Q8CGF5 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tmem56Q8CGF5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.02■□□□□ 0.16
Tmem56Q8CGF5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tmem56Q8CGF5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tmem56Q8CGF5 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.02■□□□□ 0.16
Tmem56Q8CGF5 Gm13234-201ENSMUST00000120010 747 ntBASIC16.02■□□□□ 0.16
Tmem56Q8CGF5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.02■□□□□ 0.16
Tmem56Q8CGF5 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Tmem56Q8CGF5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Tmem56Q8CGF5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tmem56Q8CGF5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tmem56Q8CGF5 Reep4-203ENSMUST00000226563 1444 ntBASIC16.02■□□□□ 0.15
Tmem56Q8CGF5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.01■□□□□ 0.15
Tmem56Q8CGF5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem56Q8CGF5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Gm13146-201ENSMUST00000118508 780 ntBASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem56Q8CGF5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Tmem56Q8CGF5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tmem56Q8CGF5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tmem56Q8CGF5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Tmem56Q8CGF5 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Tmem56Q8CGF5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Tmem56Q8CGF5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms