Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx30Q8CE50 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Snx30Q8CE50 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Snx30Q8CE50 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx30Q8CE50 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx30Q8CE50 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx30Q8CE50 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.2■□□□□ 0.66
Snx30Q8CE50 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.2■□□□□ 0.66
Snx30Q8CE50 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx30Q8CE50 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx30Q8CE50 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Snx30Q8CE50 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Snx30Q8CE50 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx30Q8CE50 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx30Q8CE50 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.19■□□□□ 0.66
Snx30Q8CE50 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.19■□□□□ 0.66
Snx30Q8CE50 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx30Q8CE50 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx30Q8CE50 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx30Q8CE50 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx30Q8CE50 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Snx30Q8CE50 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx30Q8CE50 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx30Q8CE50 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx30Q8CE50 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx30Q8CE50 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx30Q8CE50 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.18■□□□□ 0.66
Snx30Q8CE50 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx30Q8CE50 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx30Q8CE50 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Snx30Q8CE50 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Snx30Q8CE50 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.18■□□□□ 0.66
Snx30Q8CE50 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Snx30Q8CE50 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Snx30Q8CE50 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snx30Q8CE50 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx30Q8CE50 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snx30Q8CE50 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.17■□□□□ 0.66
Snx30Q8CE50 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.17■□□□□ 0.66
Snx30Q8CE50 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx30Q8CE50 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Snx30Q8CE50 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx30Q8CE50 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Snx30Q8CE50 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.16■□□□□ 0.66
Snx30Q8CE50 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Gm13146-201ENSMUST00000118508 780 ntBASIC19.16■□□□□ 0.66
Snx30Q8CE50 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Gm8495-201ENSMUST00000188740 694 ntBASIC19.16■□□□□ 0.66
Snx30Q8CE50 Gm42642-201ENSMUST00000200683 355 ntBASIC19.16■□□□□ 0.66
Snx30Q8CE50 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snx30Q8CE50 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx30Q8CE50 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Snx30Q8CE50 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx30Q8CE50 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx30Q8CE50 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Snx30Q8CE50 Gm10033-202ENSMUST00000211874 928 ntBASIC19.15■□□□□ 0.66
Snx30Q8CE50 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx30Q8CE50 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx30Q8CE50 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snx30Q8CE50 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Snx30Q8CE50 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.14■□□□□ 0.66
Snx30Q8CE50 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Snx30Q8CE50 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Snx30Q8CE50 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Snx30Q8CE50 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Snx30Q8CE50 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snx30Q8CE50 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Snx30Q8CE50 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snx30Q8CE50 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Snx30Q8CE50 Gm18671-201ENSMUST00000214826 683 ntBASIC19.14■□□□□ 0.65
Snx30Q8CE50 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snx30Q8CE50 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.14■□□□□ 0.65
Snx30Q8CE50 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snx30Q8CE50 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.14■□□□□ 0.65
Snx30Q8CE50 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snx30Q8CE50 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snx30Q8CE50 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snx30Q8CE50 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snx30Q8CE50 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.14■□□□□ 0.65
Snx30Q8CE50 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Snx30Q8CE50 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Snx30Q8CE50 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snx30Q8CE50 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms