Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb7Q8CDY9 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb7Q8CDY9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb7Q8CDY9 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 BC021767-201ENSMUST00000126387 1716 ntBASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb7Q8CDY9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb7Q8CDY9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb7Q8CDY9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb7Q8CDY9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb7Q8CDY9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms