Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brat1Q8C3R1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brat1Q8C3R1 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brat1Q8C3R1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Brat1Q8C3R1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brat1Q8C3R1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Brat1Q8C3R1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brat1Q8C3R1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Brat1Q8C3R1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brat1Q8C3R1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Brat1Q8C3R1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brat1Q8C3R1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brat1Q8C3R1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Brat1Q8C3R1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.67■□□□□ 0.74
Brat1Q8C3R1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Brat1Q8C3R1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.67■□□□□ 0.74
Brat1Q8C3R1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Brat1Q8C3R1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Brat1Q8C3R1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Brat1Q8C3R1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Brat1Q8C3R1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Brat1Q8C3R1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Brat1Q8C3R1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brat1Q8C3R1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.64■□□□□ 0.73
Brat1Q8C3R1 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.64■□□□□ 0.73
Brat1Q8C3R1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brat1Q8C3R1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brat1Q8C3R1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brat1Q8C3R1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brat1Q8C3R1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brat1Q8C3R1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Brat1Q8C3R1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.63■□□□□ 0.73
Brat1Q8C3R1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brat1Q8C3R1 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.63■□□□□ 0.73
Brat1Q8C3R1 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brat1Q8C3R1 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.63■□□□□ 0.73
Brat1Q8C3R1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brat1Q8C3R1 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brat1Q8C3R1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brat1Q8C3R1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brat1Q8C3R1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Brat1Q8C3R1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.62■□□□□ 0.73
Brat1Q8C3R1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Brat1Q8C3R1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brat1Q8C3R1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brat1Q8C3R1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Brat1Q8C3R1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.61■□□□□ 0.73
Brat1Q8C3R1 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.61■□□□□ 0.73
Brat1Q8C3R1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brat1Q8C3R1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Brat1Q8C3R1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.61■□□□□ 0.73
Brat1Q8C3R1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brat1Q8C3R1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Brat1Q8C3R1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Brat1Q8C3R1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms