Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tsen54Q8C2A2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tsen54Q8C2A2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Golgb1-201ENSMUST00000023534 498 ntBASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Tsen54Q8C2A2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Tsen54Q8C2A2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tsen54Q8C2A2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tsen54Q8C2A2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tsen54Q8C2A2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tsen54Q8C2A2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tsen54Q8C2A2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tsen54Q8C2A2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.55■□□□□ 0.08
Tsen54Q8C2A2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms