Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp43Q8BUM9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp43Q8BUM9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Usp43Q8BUM9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Gm42642-201ENSMUST00000200683 355 ntBASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.96■□□□□ 0.63
Usp43Q8BUM9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp43Q8BUM9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp43Q8BUM9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Usp43Q8BUM9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Usp43Q8BUM9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
Usp43Q8BUM9 Gm18284-201ENSMUST00000172604 624 ntBASIC18.95■□□□□ 0.62
Usp43Q8BUM9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Usp43Q8BUM9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp43Q8BUM9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Usp43Q8BUM9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp43Q8BUM9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Usp43Q8BUM9 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.94■□□□□ 0.62
Usp43Q8BUM9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp43Q8BUM9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Usp43Q8BUM9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Usp43Q8BUM9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp43Q8BUM9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Usp43Q8BUM9 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.94■□□□□ 0.62
Usp43Q8BUM9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Usp43Q8BUM9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Gm18671-201ENSMUST00000214826 683 ntBASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp43Q8BUM9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp43Q8BUM9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp43Q8BUM9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.91■□□□□ 0.62
Usp43Q8BUM9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Usp43Q8BUM9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.91■□□□□ 0.62
Usp43Q8BUM9 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.91■□□□□ 0.62
Usp43Q8BUM9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp43Q8BUM9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Usp43Q8BUM9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp43Q8BUM9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.91■□□□□ 0.62
Usp43Q8BUM9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp43Q8BUM9 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp43Q8BUM9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp43Q8BUM9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Usp43Q8BUM9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp43Q8BUM9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp43Q8BUM9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.89■□□□□ 0.61
Usp43Q8BUM9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.89■□□□□ 0.61
Usp43Q8BUM9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp43Q8BUM9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp43Q8BUM9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp43Q8BUM9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp43Q8BUM9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms