Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpne3Q8BT60 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpne3Q8BT60 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.01■□□□□ 0.47
Cpne3Q8BT60 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cpne3Q8BT60 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18■□□□□ 0.47
Cpne3Q8BT60 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
Cpne3Q8BT60 Gm27801-201ENSMUST00000184174 223 ntBASIC18■□□□□ 0.47
Cpne3Q8BT60 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cpne3Q8BT60 Gm6139-201ENSMUST00000079261 882 ntBASIC18■□□□□ 0.47
Cpne3Q8BT60 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18■□□□□ 0.47
Cpne3Q8BT60 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cpne3Q8BT60 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cpne3Q8BT60 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpne3Q8BT60 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne3Q8BT60 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne3Q8BT60 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne3Q8BT60 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne3Q8BT60 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.99■□□□□ 0.47
Cpne3Q8BT60 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne3Q8BT60 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne3Q8BT60 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne3Q8BT60 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne3Q8BT60 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpne3Q8BT60 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Gm26833-201ENSMUST00000180899 440 ntBASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Gm43017-201ENSMUST00000198296 752 ntBASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cpne3Q8BT60 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Gm7860-201ENSMUST00000121190 879 ntBASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpne3Q8BT60 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.96■□□□□ 0.47
Cpne3Q8BT60 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.96■□□□□ 0.47
Cpne3Q8BT60 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cpne3Q8BT60 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cpne3Q8BT60 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cpne3Q8BT60 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpne3Q8BT60 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpne3Q8BT60 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpne3Q8BT60 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms