Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 AA414768-201ENSMUST00000121924 1257 ntBASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.98■□□□□ 0.15
Smg1Q8BKX6 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Gm44771-201ENSMUST00000206975 626 ntBASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Gm44549-201ENSMUST00000208351 577 ntBASIC15.98■□□□□ 0.15
Smg1Q8BKX6 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Smg1Q8BKX6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.98■□□□□ 0.15
Smg1Q8BKX6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Smg1Q8BKX6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smg1Q8BKX6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smg1Q8BKX6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.96■□□□□ 0.15
Smg1Q8BKX6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smg1Q8BKX6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smg1Q8BKX6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smg1Q8BKX6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Smg1Q8BKX6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Smg1Q8BKX6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Smg1Q8BKX6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Smg1Q8BKX6 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.96■□□□□ 0.14
Smg1Q8BKX6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Smg1Q8BKX6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Smg1Q8BKX6 Gm5867-201ENSMUST00000063197 592 ntBASIC15.96■□□□□ 0.14
Smg1Q8BKX6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Smg1Q8BKX6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smg1Q8BKX6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smg1Q8BKX6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smg1Q8BKX6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smg1Q8BKX6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smg1Q8BKX6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smg1Q8BKX6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Smg1Q8BKX6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Smg1Q8BKX6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Gm10013-201ENSMUST00000106074 672 ntBASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Gm13158-201ENSMUST00000122007 736 ntBASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Smg1Q8BKX6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Smg1Q8BKX6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smg1Q8BKX6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Smg1Q8BKX6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms