Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf38Q8BI21 Gm7860-201ENSMUST00000121190 879 ntBASIC18■□□□□ 0.47
Rnf38Q8BI21 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Rnf38Q8BI21 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf38Q8BI21 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf38Q8BI21 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rnf38Q8BI21 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18■□□□□ 0.47
Rnf38Q8BI21 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf38Q8BI21 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rnf38Q8BI21 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rnf38Q8BI21 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf38Q8BI21 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf38Q8BI21 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf38Q8BI21 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Rnf38Q8BI21 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf38Q8BI21 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf38Q8BI21 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rnf38Q8BI21 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rnf38Q8BI21 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.97■□□□□ 0.47
Rnf38Q8BI21 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rnf38Q8BI21 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Gm43173-201ENSMUST00000202246 593 ntBASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Gm6139-201ENSMUST00000079261 882 ntBASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rnf38Q8BI21 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Gm8493-201ENSMUST00000196881 489 ntBASIC17.94■□□□□ 0.46
Rnf38Q8BI21 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rnf38Q8BI21 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms