Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim62Q80V85 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim62Q80V85 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim62Q80V85 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim62Q80V85 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim62Q80V85 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim62Q80V85 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim62Q80V85 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Trim62Q80V85 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Trim62Q80V85 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim62Q80V85 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim62Q80V85 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim62Q80V85 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim62Q80V85 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.33■□□□□ 0.68
Trim62Q80V85 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim62Q80V85 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.33■□□□□ 0.68
Trim62Q80V85 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim62Q80V85 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim62Q80V85 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim62Q80V85 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim62Q80V85 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim62Q80V85 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim62Q80V85 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim62Q80V85 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim62Q80V85 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim62Q80V85 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim62Q80V85 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim62Q80V85 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim62Q80V85 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trim62Q80V85 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim62Q80V85 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.32■□□□□ 0.68
Trim62Q80V85 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim62Q80V85 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim62Q80V85 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim62Q80V85 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trim62Q80V85 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim62Q80V85 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim62Q80V85 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim62Q80V85 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim62Q80V85 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim62Q80V85 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim62Q80V85 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim62Q80V85 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim62Q80V85 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim62Q80V85 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trim62Q80V85 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Trim62Q80V85 Gm6211-202ENSMUST00000167849 925 ntBASIC19.31■□□□□ 0.68
Trim62Q80V85 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.31■□□□□ 0.68
Trim62Q80V85 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim62Q80V85 Gm10602-201ENSMUST00000098239 609 ntBASIC19.31■□□□□ 0.68
Trim62Q80V85 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim62Q80V85 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trim62Q80V85 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim62Q80V85 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim62Q80V85 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Trim62Q80V85 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim62Q80V85 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.29■□□□□ 0.68
Trim62Q80V85 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim62Q80V85 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim62Q80V85 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim62Q80V85 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trim62Q80V85 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim62Q80V85 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim62Q80V85 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim62Q80V85 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim62Q80V85 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim62Q80V85 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trim62Q80V85 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim62Q80V85 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim62Q80V85 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim62Q80V85 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim62Q80V85 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim62Q80V85 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim62Q80V85 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim62Q80V85 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim62Q80V85 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Trim62Q80V85 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim62Q80V85 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim62Q80V85 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim62Q80V85 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim62Q80V85 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.27■□□□□ 0.68
Trim62Q80V85 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.27■□□□□ 0.68
Trim62Q80V85 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim62Q80V85 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim62Q80V85 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim62Q80V85 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim62Q80V85 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim62Q80V85 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms