Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh8Q7TSK3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Pcdh8Q7TSK3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Gm20760-201ENSMUST00000179197 648 ntBASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdh8Q7TSK3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Pcdh8Q7TSK3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh8Q7TSK3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Pcdh8Q7TSK3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh8Q7TSK3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh8Q7TSK3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh8Q7TSK3 Gm12527-201ENSMUST00000117967 564 ntBASIC18.36■□□□□ 0.53
Pcdh8Q7TSK3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdh8Q7TSK3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh8Q7TSK3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh8Q7TSK3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh8Q7TSK3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdh8Q7TSK3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh8Q7TSK3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh8Q7TSK3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh8Q7TSK3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh8Q7TSK3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh8Q7TSK3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh8Q7TSK3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh8Q7TSK3 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh8Q7TSK3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh8Q7TSK3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh8Q7TSK3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh8Q7TSK3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh8Q7TSK3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh8Q7TSK3 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh8Q7TSK3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh8Q7TSK3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh8Q7TSK3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.33■□□□□ 0.52
Pcdh8Q7TSK3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms