Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.32■□□□□ 0.84
Ctdp1Q7TSG2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ctdp1Q7TSG2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ctdp1Q7TSG2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ctdp1Q7TSG2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ctdp1Q7TSG2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ctdp1Q7TSG2 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Mir7075-201ENSMUST00000184187 82 ntBASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ctdp1Q7TSG2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.28■□□□□ 0.84
Ctdp1Q7TSG2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ctdp1Q7TSG2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ctdp1Q7TSG2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ctdp1Q7TSG2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ctdp1Q7TSG2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ctdp1Q7TSG2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ctdp1Q7TSG2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ctdp1Q7TSG2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ctdp1Q7TSG2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdp1Q7TSG2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdp1Q7TSG2 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.27■□□□□ 0.84
Ctdp1Q7TSG2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdp1Q7TSG2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.27■□□□□ 0.84
Ctdp1Q7TSG2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ctdp1Q7TSG2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.27■□□□□ 0.84
Ctdp1Q7TSG2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdp1Q7TSG2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdp1Q7TSG2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ctdp1Q7TSG2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ctdp1Q7TSG2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Ctdp1Q7TSG2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Ctdp1Q7TSG2 Gm6139-201ENSMUST00000079261 882 ntBASIC20.26■□□□□ 0.83
Ctdp1Q7TSG2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ctdp1Q7TSG2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ctdp1Q7TSG2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdp1Q7TSG2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ctdp1Q7TSG2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdp1Q7TSG2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdp1Q7TSG2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdp1Q7TSG2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctdp1Q7TSG2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Ctdp1Q7TSG2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdp1Q7TSG2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.25■□□□□ 0.83
Ctdp1Q7TSG2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdp1Q7TSG2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdp1Q7TSG2 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.25■□□□□ 0.83
Ctdp1Q7TSG2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdp1Q7TSG2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdp1Q7TSG2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctdp1Q7TSG2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
Ctdp1Q7TSG2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ctdp1Q7TSG2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms