Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf220Q6PDX6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.63■□□□□ 0.41
Rnf220Q6PDX6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf220Q6PDX6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf220Q6PDX6 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf220Q6PDX6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf220Q6PDX6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf220Q6PDX6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Rnf220Q6PDX6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf220Q6PDX6 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.59■□□□□ 0.41
Rnf220Q6PDX6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf220Q6PDX6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rnf220Q6PDX6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf220Q6PDX6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf220Q6PDX6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf220Q6PDX6 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rnf220Q6PDX6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.58■□□□□ 0.41
Rnf220Q6PDX6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Rnf220Q6PDX6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms