Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3bQ62177 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3bQ62177 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Sema3bQ62177 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3bQ62177 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.72■□□□□ 0.43
Sema3bQ62177 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Sema3bQ62177 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3bQ62177 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Sema3bQ62177 Gm27275-201ENSMUST00000184318 272 ntBASIC17.72■□□□□ 0.43
Sema3bQ62177 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3bQ62177 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3bQ62177 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sema3bQ62177 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sema3bQ62177 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.72■□□□□ 0.43
Sema3bQ62177 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.72■□□□□ 0.43
Sema3bQ62177 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Sema3bQ62177 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3bQ62177 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3bQ62177 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Sema3bQ62177 Gm5643-201ENSMUST00000117081 966 ntBASIC17.71■□□□□ 0.43
Sema3bQ62177 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.71■□□□□ 0.43
Sema3bQ62177 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.71■□□□□ 0.43
Sema3bQ62177 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.71■□□□□ 0.43
Sema3bQ62177 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3bQ62177 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sema3bQ62177 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sema3bQ62177 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.71■□□□□ 0.43
Sema3bQ62177 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sema3bQ62177 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sema3bQ62177 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Sema3bQ62177 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sema3bQ62177 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sema3bQ62177 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sema3bQ62177 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Sema3bQ62177 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Sema3bQ62177 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Sema3bQ62177 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Sema3bQ62177 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Sema3bQ62177 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sema3bQ62177 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sema3bQ62177 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.69■□□□□ 0.42
Sema3bQ62177 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sema3bQ62177 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sema3bQ62177 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sema3bQ62177 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sema3bQ62177 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Sema3bQ62177 Gm12896-201ENSMUST00000118430 226 ntBASIC17.68■□□□□ 0.42
Sema3bQ62177 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.68■□□□□ 0.42
Sema3bQ62177 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.68■□□□□ 0.42
Sema3bQ62177 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sema3bQ62177 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Sema3bQ62177 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sema3bQ62177 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sema3bQ62177 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sema3bQ62177 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sema3bQ62177 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sema3bQ62177 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sema3bQ62177 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sema3bQ62177 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sema3bQ62177 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.67■□□□□ 0.42
Sema3bQ62177 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sema3bQ62177 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sema3bQ62177 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sema3bQ62177 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sema3bQ62177 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sema3bQ62177 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.67■□□□□ 0.42
Sema3bQ62177 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sema3bQ62177 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sema3bQ62177 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.66■□□□□ 0.42
Sema3bQ62177 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sema3bQ62177 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sema3bQ62177 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sema3bQ62177 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.66■□□□□ 0.42
Sema3bQ62177 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sema3bQ62177 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Sema3bQ62177 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms