Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Satb1Q60611 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.27■□□□□ 0.67
Satb1Q60611 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Satb1Q60611 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Satb1Q60611 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Satb1Q60611 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Satb1Q60611 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Satb1Q60611 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Satb1Q60611 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.26■□□□□ 0.67
Satb1Q60611 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Satb1Q60611 Gm21362-201ENSMUST00000194272 928 ntBASIC19.26■□□□□ 0.67
Satb1Q60611 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Satb1Q60611 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Satb1Q60611 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Satb1Q60611 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Satb1Q60611 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Satb1Q60611 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Satb1Q60611 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Satb1Q60611 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Satb1Q60611 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Satb1Q60611 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Satb1Q60611 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Satb1Q60611 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Satb1Q60611 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Satb1Q60611 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.25■□□□□ 0.67
Satb1Q60611 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Satb1Q60611 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.25■□□□□ 0.67
Satb1Q60611 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.25■□□□□ 0.67
Satb1Q60611 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.25■□□□□ 0.67
Satb1Q60611 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Satb1Q60611 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Satb1Q60611 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.25■□□□□ 0.67
Satb1Q60611 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Satb1Q60611 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.24■□□□□ 0.67
Satb1Q60611 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Satb1Q60611 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.24■□□□□ 0.67
Satb1Q60611 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Satb1Q60611 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.24■□□□□ 0.67
Satb1Q60611 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Satb1Q60611 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Satb1Q60611 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.24■□□□□ 0.67
Satb1Q60611 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.24■□□□□ 0.67
Satb1Q60611 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Satb1Q60611 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.24■□□□□ 0.67
Satb1Q60611 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Satb1Q60611 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Satb1Q60611 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Satb1Q60611 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Satb1Q60611 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Satb1Q60611 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.23■□□□□ 0.67
Satb1Q60611 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Satb1Q60611 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Satb1Q60611 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Satb1Q60611 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Satb1Q60611 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Satb1Q60611 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Satb1Q60611 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Satb1Q60611 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Satb1Q60611 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.22■□□□□ 0.67
Satb1Q60611 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.22■□□□□ 0.67
Satb1Q60611 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.22■□□□□ 0.67
Satb1Q60611 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Satb1Q60611 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Satb1Q60611 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.22■□□□□ 0.67
Satb1Q60611 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Satb1Q60611 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Satb1Q60611 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Satb1Q60611 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Satb1Q60611 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Satb1Q60611 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Satb1Q60611 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.21■□□□□ 0.67
Satb1Q60611 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Satb1Q60611 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Satb1Q60611 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Satb1Q60611 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.2■□□□□ 0.66
Satb1Q60611 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms