Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.87□□□□□ -0.03
Trav2Q5R1I9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav2Q5R1I9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav2Q5R1I9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav2Q5R1I9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav2Q5R1I9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav2Q5R1I9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Gm27011-201ENSMUST00000182352 972 ntBASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav2Q5R1I9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.84□□□□□ -0.03
Trav2Q5R1I9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav2Q5R1I9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav2Q5R1I9 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.83□□□□□ -0.03
Trav2Q5R1I9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav2Q5R1I9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trav2Q5R1I9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms