Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav3-1Q5R1I8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Rncr4-201ENSMUST00000194541 2234 ntBASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Gm43909-201ENSMUST00000203443 1876 ntBASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav3-1Q5R1I8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav3-1Q5R1I8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-1Q5R1I8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.71□□□□□ -0.38
Trav3-1Q5R1I8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-1Q5R1I8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-1Q5R1I8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-1Q5R1I8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav3-1Q5R1I8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav3-1Q5R1I8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav3-1Q5R1I8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav3-1Q5R1I8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms