Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Trav7d-3Q5R1I1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Gm12251-201ENSMUST00000117893 792 ntBASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7d-3Q5R1I1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 BC021767-201ENSMUST00000126387 1716 ntBASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Smad6-203ENSMUST00000179458 273 ntBASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7d-3Q5R1I1 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Gm8493-201ENSMUST00000196881 489 ntBASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7d-3Q5R1I1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Gm21956-201ENSMUST00000179946 522 ntBASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7d-3Q5R1I1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav7d-3Q5R1I1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms