Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Gm22238-201ENSMUST00000175222 88 ntBASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trdv2-2Q5R1A4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trdv2-2Q5R1A4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Gm15546-201ENSMUST00000122095 826 ntBASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trdv2-2Q5R1A4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trdv2-2Q5R1A4 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Trdv2-2Q5R1A4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trdv2-2Q5R1A4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trdv2-2Q5R1A4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trdv2-2Q5R1A4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trdv2-2Q5R1A4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trdv2-2Q5R1A4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Gm5812-201ENSMUST00000061073 957 ntBASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdv2-2Q5R1A4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdv2-2Q5R1A4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms