Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps41Q5KU39 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.45■□□□□ 0.7
Vps41Q5KU39 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Vps41Q5KU39 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vps41Q5KU39 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Vps41Q5KU39 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vps41Q5KU39 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Gm43137-201ENSMUST00000198052 594 ntBASIC19.42■□□□□ 0.7
Vps41Q5KU39 Spcs1-204ENSMUST00000226782 949 ntBASIC19.42■□□□□ 0.7
Vps41Q5KU39 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.42■□□□□ 0.7
Vps41Q5KU39 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vps41Q5KU39 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Vps41Q5KU39 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vps41Q5KU39 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps41Q5KU39 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Vps41Q5KU39 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.4■□□□□ 0.7
Vps41Q5KU39 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vps41Q5KU39 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps41Q5KU39 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Vps41Q5KU39 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Vps41Q5KU39 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.4■□□□□ 0.7
Vps41Q5KU39 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.4■□□□□ 0.7
Vps41Q5KU39 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Vps41Q5KU39 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vps41Q5KU39 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms