Protein–RNA interactions for Protein: Q571G4

Lin54, Protein lin-54 homolog, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin54Q571G4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.17■□□□□ 0.18
Lin54Q571G4 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lin54Q571G4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin54Q571G4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin54Q571G4 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.17■□□□□ 0.18
Lin54Q571G4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin54Q571G4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lin54Q571G4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin54Q571G4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lin54Q571G4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lin54Q571G4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lin54Q571G4 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.17■□□□□ 0.18
Lin54Q571G4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Lin54Q571G4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.16■□□□□ 0.18
Lin54Q571G4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.16■□□□□ 0.18
Lin54Q571G4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Lin54Q571G4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lin54Q571G4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin54Q571G4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lin54Q571G4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.15■□□□□ 0.18
Lin54Q571G4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lin54Q571G4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin54Q571G4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lin54Q571G4 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.15■□□□□ 0.18
Lin54Q571G4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin54Q571G4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin54Q571G4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin54Q571G4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lin54Q571G4 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.15■□□□□ 0.18
Lin54Q571G4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin54Q571G4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lin54Q571G4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lin54Q571G4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lin54Q571G4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin54Q571G4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin54Q571G4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin54Q571G4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.13■□□□□ 0.17
Lin54Q571G4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lin54Q571G4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin54Q571G4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lin54Q571G4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lin54Q571G4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Lin54Q571G4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lin54Q571G4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lin54Q571G4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lin54Q571G4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lin54Q571G4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Lin54Q571G4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Lin54Q571G4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.12■□□□□ 0.17
Lin54Q571G4 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lin54Q571G4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lin54Q571G4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.12■□□□□ 0.17
Lin54Q571G4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lin54Q571G4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lin54Q571G4 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.11■□□□□ 0.17
Lin54Q571G4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.11■□□□□ 0.17
Lin54Q571G4 Gm15820-201ENSMUST00000201566 728 ntBASIC16.11■□□□□ 0.17
Lin54Q571G4 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.11■□□□□ 0.17
Lin54Q571G4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lin54Q571G4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lin54Q571G4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.11■□□□□ 0.17
Lin54Q571G4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lin54Q571G4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lin54Q571G4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.11■□□□□ 0.17
Lin54Q571G4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lin54Q571G4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lin54Q571G4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lin54Q571G4 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lin54Q571G4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lin54Q571G4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lin54Q571G4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lin54Q571G4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms