Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Lin28bQ45KJ6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Lin28bQ45KJ6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Lin28bQ45KJ6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28bQ45KJ6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28bQ45KJ6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28bQ45KJ6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28bQ45KJ6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.76■□□□□ 0.43
Lin28bQ45KJ6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Lin28bQ45KJ6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28bQ45KJ6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28bQ45KJ6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28bQ45KJ6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.76■□□□□ 0.43
Lin28bQ45KJ6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28bQ45KJ6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28bQ45KJ6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28bQ45KJ6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28bQ45KJ6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28bQ45KJ6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lin28bQ45KJ6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28bQ45KJ6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.74■□□□□ 0.43
Lin28bQ45KJ6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28bQ45KJ6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Lin28bQ45KJ6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28bQ45KJ6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28bQ45KJ6 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Gm10812-201ENSMUST00000099864 546 ntBASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.71■□□□□ 0.43
Lin28bQ45KJ6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lin28bQ45KJ6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Lin28bQ45KJ6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lin28bQ45KJ6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lin28bQ45KJ6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lin28bQ45KJ6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lin28bQ45KJ6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms