Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1d1Q3UV55 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1d1Q3UV55 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1d1Q3UV55 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1d1Q3UV55 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.65■□□□□ 0.74
Nr1d1Q3UV55 Gm5874-201ENSMUST00000096101 508 ntBASIC19.65■□□□□ 0.74
Nr1d1Q3UV55 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1d1Q3UV55 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nr1d1Q3UV55 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.65■□□□□ 0.74
Nr1d1Q3UV55 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1d1Q3UV55 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nr1d1Q3UV55 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nr1d1Q3UV55 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Nr1d1Q3UV55 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nr1d1Q3UV55 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1d1Q3UV55 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1d1Q3UV55 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1d1Q3UV55 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1d1Q3UV55 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
Nr1d1Q3UV55 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1d1Q3UV55 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1d1Q3UV55 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1d1Q3UV55 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1d1Q3UV55 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1d1Q3UV55 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.63■□□□□ 0.73
Nr1d1Q3UV55 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nr1d1Q3UV55 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1d1Q3UV55 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.62■□□□□ 0.73
Nr1d1Q3UV55 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nr1d1Q3UV55 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1d1Q3UV55 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.62■□□□□ 0.73
Nr1d1Q3UV55 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1d1Q3UV55 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1d1Q3UV55 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1d1Q3UV55 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1d1Q3UV55 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nr1d1Q3UV55 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.62■□□□□ 0.73
Nr1d1Q3UV55 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Nr1d1Q3UV55 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Nr1d1Q3UV55 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1d1Q3UV55 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Nr1d1Q3UV55 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1d1Q3UV55 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nr1d1Q3UV55 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1d1Q3UV55 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1d1Q3UV55 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.59■□□□□ 0.73
Nr1d1Q3UV55 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1d1Q3UV55 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nr1d1Q3UV55 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Nr1d1Q3UV55 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Nr1d1Q3UV55 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1d1Q3UV55 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Nr1d1Q3UV55 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Nr1d1Q3UV55 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1d1Q3UV55 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1d1Q3UV55 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1d1Q3UV55 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1d1Q3UV55 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nr1d1Q3UV55 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.58■□□□□ 0.72
Nr1d1Q3UV55 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1d1Q3UV55 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
Nr1d1Q3UV55 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1d1Q3UV55 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nr1d1Q3UV55 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms