Protein–RNA interactions for Protein: Q3UUV5

Skap1, Src kinase-associated phosphoprotein 1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skap1Q3UUV5 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Skap1Q3UUV5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Skap1Q3UUV5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Skap1Q3UUV5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.6■□□□□ 0.89
Skap1Q3UUV5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Skap1Q3UUV5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Skap1Q3UUV5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Skap1Q3UUV5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Skap1Q3UUV5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Gm12527-201ENSMUST00000117967 564 ntBASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Skap1Q3UUV5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.58■□□□□ 0.89
Skap1Q3UUV5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Skap1Q3UUV5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Skap1Q3UUV5 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Skap1Q3UUV5 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Skap1Q3UUV5 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Skap1Q3UUV5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Skap1Q3UUV5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Skap1Q3UUV5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Skap1Q3UUV5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Skap1Q3UUV5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Skap1Q3UUV5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Skap1Q3UUV5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Skap1Q3UUV5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Skap1Q3UUV5 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Skap1Q3UUV5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Skap1Q3UUV5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Skap1Q3UUV5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Skap1Q3UUV5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Skap1Q3UUV5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Skap1Q3UUV5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Skap1Q3UUV5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Skap1Q3UUV5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.55■□□□□ 0.88
Skap1Q3UUV5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Skap1Q3UUV5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Skap1Q3UUV5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Skap1Q3UUV5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Skap1Q3UUV5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skap1Q3UUV5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skap1Q3UUV5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skap1Q3UUV5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skap1Q3UUV5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skap1Q3UUV5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Skap1Q3UUV5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Skap1Q3UUV5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.53■□□□□ 0.88
Skap1Q3UUV5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Skap1Q3UUV5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.53■□□□□ 0.88
Skap1Q3UUV5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.53■□□□□ 0.88
Skap1Q3UUV5 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.53■□□□□ 0.88
Skap1Q3UUV5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms