Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Gm13534-201ENSMUST00000121169 513 ntBASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cdkl5Q3UTQ8 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdkl5Q3UTQ8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdkl5Q3UTQ8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdkl5Q3UTQ8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdkl5Q3UTQ8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Cdkl5Q3UTQ8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
Cdkl5Q3UTQ8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdkl5Q3UTQ8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdkl5Q3UTQ8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdkl5Q3UTQ8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cdkl5Q3UTQ8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.64■■□□□ 1.05
Cdkl5Q3UTQ8 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.64■■□□□ 1.05
Cdkl5Q3UTQ8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.64■■□□□ 1.05
Cdkl5Q3UTQ8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cdkl5Q3UTQ8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdkl5Q3UTQ8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.64■■□□□ 1.05
Cdkl5Q3UTQ8 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.63■■□□□ 1.05
Cdkl5Q3UTQ8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl5Q3UTQ8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl5Q3UTQ8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl5Q3UTQ8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl5Q3UTQ8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl5Q3UTQ8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl5Q3UTQ8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl5Q3UTQ8 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl5Q3UTQ8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdkl5Q3UTQ8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Gm5874-201ENSMUST00000096101 508 ntBASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Cdkl5Q3UTQ8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cdkl5Q3UTQ8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdkl5Q3UTQ8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdkl5Q3UTQ8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdkl5Q3UTQ8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
Cdkl5Q3UTQ8 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.6■■□□□ 1.05
Cdkl5Q3UTQ8 Gm18671-201ENSMUST00000214826 683 ntBASIC21.6■■□□□ 1.05
Cdkl5Q3UTQ8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdkl5Q3UTQ8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.6■■□□□ 1.05
Cdkl5Q3UTQ8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdkl5Q3UTQ8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdkl5Q3UTQ8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms