Protein–RNA interactions for Protein: Q04519

Smpd1, Sphingomyelin phosphodiesterase, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd1Q04519 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Smpd1Q04519 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smpd1Q04519 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smpd1Q04519 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.81■□□□□ 0.76
Smpd1Q04519 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.81■□□□□ 0.76
Smpd1Q04519 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Mir6982-201ENSMUST00000184354 68 ntBASIC19.81■□□□□ 0.76
Smpd1Q04519 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Golph3-202ENSMUST00000226517 2359 ntBASIC19.81■□□□□ 0.76
Smpd1Q04519 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Smpd1Q04519 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smpd1Q04519 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smpd1Q04519 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smpd1Q04519 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.8■□□□□ 0.76
Smpd1Q04519 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.8■□□□□ 0.76
Smpd1Q04519 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smpd1Q04519 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.8■□□□□ 0.76
Smpd1Q04519 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Smpd1Q04519 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.8■□□□□ 0.76
Smpd1Q04519 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smpd1Q04519 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Smpd1Q04519 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.8■□□□□ 0.76
Smpd1Q04519 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smpd1Q04519 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Smpd1Q04519 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smpd1Q04519 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smpd1Q04519 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smpd1Q04519 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Smpd1Q04519 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smpd1Q04519 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smpd1Q04519 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smpd1Q04519 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smpd1Q04519 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smpd1Q04519 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Smpd1Q04519 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Smpd1Q04519 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smpd1Q04519 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Smpd1Q04519 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smpd1Q04519 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smpd1Q04519 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Smpd1Q04519 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smpd1Q04519 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.78■□□□□ 0.76
Smpd1Q04519 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smpd1Q04519 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Smpd1Q04519 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.78■□□□□ 0.76
Smpd1Q04519 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smpd1Q04519 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smpd1Q04519 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smpd1Q04519 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smpd1Q04519 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.77■□□□□ 0.76
Smpd1Q04519 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Smpd1Q04519 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smpd1Q04519 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smpd1Q04519 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Smpd1Q04519 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smpd1Q04519 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smpd1Q04519 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smpd1Q04519 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smpd1Q04519 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smpd1Q04519 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smpd1Q04519 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.76■□□□□ 0.75
Smpd1Q04519 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.76■□□□□ 0.75
Smpd1Q04519 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Smpd1Q04519 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smpd1Q04519 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smpd1Q04519 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smpd1Q04519 Mir7071-201ENSMUST00000184847 69 ntBASIC19.75■□□□□ 0.75
Smpd1Q04519 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smpd1Q04519 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.75■□□□□ 0.75
Smpd1Q04519 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Smpd1Q04519 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smpd1Q04519 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smpd1Q04519 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smpd1Q04519 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smpd1Q04519 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smpd1Q04519 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smpd1Q04519 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smpd1Q04519 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Smpd1Q04519 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
Smpd1Q04519 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smpd1Q04519 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smpd1Q04519 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.74■□□□□ 0.75
Smpd1Q04519 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.74■□□□□ 0.75
Smpd1Q04519 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.74■□□□□ 0.75
Smpd1Q04519 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
Smpd1Q04519 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smpd1Q04519 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smpd1Q04519 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smpd1Q04519 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smpd1Q04519 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms