Protein–RNA interactions for Protein: P60897

Sem1, 26S proteasome complex subunit SEM1, mousemouse

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sem1P60897 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sem1P60897 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sem1P60897 Dancr-204ENSMUST00000132389 2347 ntBASIC17.76■□□□□ 0.43
Sem1P60897 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sem1P60897 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sem1P60897 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sem1P60897 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sem1P60897 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sem1P60897 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sem1P60897 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Sem1P60897 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sem1P60897 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.75■□□□□ 0.43
Sem1P60897 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.75■□□□□ 0.43
Sem1P60897 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sem1P60897 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sem1P60897 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sem1P60897 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sem1P60897 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sem1P60897 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sem1P60897 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.75■□□□□ 0.43
Sem1P60897 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sem1P60897 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sem1P60897 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sem1P60897 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sem1P60897 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sem1P60897 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Sem1P60897 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sem1P60897 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.73■□□□□ 0.43
Sem1P60897 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Sem1P60897 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.73■□□□□ 0.43
Sem1P60897 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.73■□□□□ 0.43
Sem1P60897 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sem1P60897 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Sem1P60897 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sem1P60897 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sem1P60897 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sem1P60897 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sem1P60897 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sem1P60897 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sem1P60897 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sem1P60897 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sem1P60897 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.72■□□□□ 0.43
Sem1P60897 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.72■□□□□ 0.43
Sem1P60897 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.72■□□□□ 0.43
Sem1P60897 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sem1P60897 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sem1P60897 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sem1P60897 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sem1P60897 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sem1P60897 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sem1P60897 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sem1P60897 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Sem1P60897 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sem1P60897 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sem1P60897 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sem1P60897 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sem1P60897 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Sem1P60897 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Sem1P60897 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sem1P60897 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sem1P60897 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sem1P60897 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sem1P60897 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sem1P60897 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sem1P60897 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sem1P60897 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sem1P60897 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sem1P60897 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sem1P60897 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sem1P60897 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sem1P60897 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sem1P60897 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sem1P60897 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Sem1P60897 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sem1P60897 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms