Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Tubgcp3P58854 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubgcp3P58854 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Tubgcp3P58854 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubgcp3P58854 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.07■□□□□ 0.64
Tubgcp3P58854 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubgcp3P58854 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tubgcp3P58854 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubgcp3P58854 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubgcp3P58854 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubgcp3P58854 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tubgcp3P58854 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Tubgcp3P58854 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.06■□□□□ 0.64
Tubgcp3P58854 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubgcp3P58854 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubgcp3P58854 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.05■□□□□ 0.64
Tubgcp3P58854 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tubgcp3P58854 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Tubgcp3P58854 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubgcp3P58854 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.05■□□□□ 0.64
Tubgcp3P58854 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Tubgcp3P58854 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.05■□□□□ 0.64
Tubgcp3P58854 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Tubgcp3P58854 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Tubgcp3P58854 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubgcp3P58854 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubgcp3P58854 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Tubgcp3P58854 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubgcp3P58854 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.04■□□□□ 0.64
Tubgcp3P58854 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Gm9988-201ENSMUST00000069786 435 ntBASIC19.04■□□□□ 0.64
Tubgcp3P58854 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubgcp3P58854 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.03■□□□□ 0.64
Tubgcp3P58854 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Tubgcp3P58854 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Tubgcp3P58854 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubgcp3P58854 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubgcp3P58854 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubgcp3P58854 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubgcp3P58854 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tubgcp3P58854 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.02■□□□□ 0.64
Tubgcp3P58854 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubgcp3P58854 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Tubgcp3P58854 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Tubgcp3P58854 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tubgcp3P58854 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tubgcp3P58854 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.01■□□□□ 0.63
Tubgcp3P58854 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
Tubgcp3P58854 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.01■□□□□ 0.63
Tubgcp3P58854 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.01■□□□□ 0.63
Tubgcp3P58854 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubgcp3P58854 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubgcp3P58854 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubgcp3P58854 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tubgcp3P58854 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tubgcp3P58854 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms