Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox18P43680 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sox18P43680 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Sox18P43680 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox18P43680 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox18P43680 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox18P43680 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Sox18P43680 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.9■□□□□ 0.46
Sox18P43680 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.9■□□□□ 0.46
Sox18P43680 Gm13158-201ENSMUST00000122007 736 ntBASIC17.9■□□□□ 0.46
Sox18P43680 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.9■□□□□ 0.46
Sox18P43680 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Sox18P43680 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox18P43680 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox18P43680 Gm5417-201ENSMUST00000079706 384 ntBASIC17.9■□□□□ 0.46
Sox18P43680 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Sox18P43680 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox18P43680 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox18P43680 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox18P43680 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Sox18P43680 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Sox18P43680 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Sox18P43680 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Sox18P43680 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox18P43680 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox18P43680 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox18P43680 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sox18P43680 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox18P43680 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sox18P43680 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox18P43680 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sox18P43680 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox18P43680 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Sox18P43680 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.88■□□□□ 0.45
Sox18P43680 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.88■□□□□ 0.45
Sox18P43680 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Sox18P43680 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox18P43680 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.88■□□□□ 0.45
Sox18P43680 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox18P43680 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox18P43680 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sox18P43680 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sox18P43680 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox18P43680 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Sox18P43680 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox18P43680 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox18P43680 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.87■□□□□ 0.45
Sox18P43680 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox18P43680 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox18P43680 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox18P43680 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox18P43680 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox18P43680 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox18P43680 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sox18P43680 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Sox18P43680 AA386476-201ENSMUST00000098781 1665 ntBASIC17.87■□□□□ 0.45
Sox18P43680 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox18P43680 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox18P43680 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox18P43680 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox18P43680 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox18P43680 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.86■□□□□ 0.45
Sox18P43680 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox18P43680 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sox18P43680 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.86■□□□□ 0.45
Sox18P43680 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sox18P43680 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sox18P43680 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.85■□□□□ 0.45
Sox18P43680 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.85■□□□□ 0.45
Sox18P43680 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox18P43680 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox18P43680 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox18P43680 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox18P43680 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox18P43680 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sox18P43680 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Sox18P43680 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Sox18P43680 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.84■□□□□ 0.45
Sox18P43680 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.84■□□□□ 0.45
Sox18P43680 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Sox18P43680 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Sox18P43680 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Sox18P43680 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Sox18P43680 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Sox18P43680 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sox18P43680 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sox18P43680 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sox18P43680 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.83■□□□□ 0.45
Sox18P43680 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms