Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdc2P43407 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.93■□□□□ 0.94
Sdc2P43407 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdc2P43407 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc2P43407 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc2P43407 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc2P43407 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Sdc2P43407 Gm43017-201ENSMUST00000198296 752 ntBASIC20.92■□□□□ 0.94
Sdc2P43407 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc2P43407 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdc2P43407 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Sdc2P43407 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Sdc2P43407 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc2P43407 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc2P43407 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc2P43407 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc2P43407 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Sdc2P43407 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Sdc2P43407 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdc2P43407 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.9■□□□□ 0.94
Sdc2P43407 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc2P43407 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc2P43407 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc2P43407 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc2P43407 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Sdc2P43407 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc2P43407 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc2P43407 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Sdc2P43407 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc2P43407 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc2P43407 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc2P43407 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc2P43407 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdc2P43407 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.89■□□□□ 0.94
Sdc2P43407 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Sdc2P43407 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sdc2P43407 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sdc2P43407 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sdc2P43407 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.89■□□□□ 0.93
Sdc2P43407 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sdc2P43407 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sdc2P43407 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sdc2P43407 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Sdc2P43407 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.88■□□□□ 0.93
Sdc2P43407 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc2P43407 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sdc2P43407 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc2P43407 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.88■□□□□ 0.93
Sdc2P43407 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc2P43407 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc2P43407 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Sdc2P43407 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc2P43407 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc2P43407 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sdc2P43407 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.88■□□□□ 0.93
Sdc2P43407 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Sdc2P43407 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.87■□□□□ 0.93
Sdc2P43407 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc2P43407 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc2P43407 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc2P43407 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc2P43407 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc2P43407 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.87■□□□□ 0.93
Sdc2P43407 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.87■□□□□ 0.93
Sdc2P43407 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc2P43407 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sdc2P43407 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Sdc2P43407 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
Sdc2P43407 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc2P43407 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.87■□□□□ 0.93
Sdc2P43407 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdc2P43407 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc2P43407 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc2P43407 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc2P43407 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sdc2P43407 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc2P43407 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc2P43407 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc2P43407 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.86■□□□□ 0.93
Sdc2P43407 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc2P43407 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc2P43407 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc2P43407 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sdc2P43407 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Sdc2P43407 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Sdc2P43407 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sdc2P43407 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Sdc2P43407 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms