Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox5P35710 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox5P35710 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Sox5P35710 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox5P35710 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sox5P35710 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Sox5P35710 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sox5P35710 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Sox5P35710 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sox5P35710 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sox5P35710 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sox5P35710 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sox5P35710 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.39■□□□□ 0.85
Sox5P35710 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sox5P35710 Gm43173-201ENSMUST00000202246 593 ntBASIC20.39■□□□□ 0.85
Sox5P35710 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.39■□□□□ 0.85
Sox5P35710 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.39■□□□□ 0.85
Sox5P35710 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox5P35710 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Sox5P35710 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.38■□□□□ 0.85
Sox5P35710 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.38■□□□□ 0.85
Sox5P35710 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox5P35710 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sox5P35710 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Sox5P35710 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.38■□□□□ 0.85
Sox5P35710 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Sox5P35710 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.37■□□□□ 0.85
Sox5P35710 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Sox5P35710 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Sox5P35710 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sox5P35710 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.36■□□□□ 0.85
Sox5P35710 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sox5P35710 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox5P35710 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox5P35710 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox5P35710 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox5P35710 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Sox5P35710 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.36■□□□□ 0.85
Sox5P35710 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.36■□□□□ 0.85
Sox5P35710 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox5P35710 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Sox5P35710 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox5P35710 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox5P35710 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox5P35710 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.36■□□□□ 0.85
Sox5P35710 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Sox5P35710 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox5P35710 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox5P35710 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox5P35710 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox5P35710 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.35■□□□□ 0.85
Sox5P35710 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.35■□□□□ 0.85
Sox5P35710 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Sox5P35710 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox5P35710 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox5P35710 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
Sox5P35710 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox5P35710 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.34■□□□□ 0.85
Sox5P35710 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Sox5P35710 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox5P35710 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox5P35710 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox5P35710 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sox5P35710 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox5P35710 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sox5P35710 Gm13241-201ENSMUST00000094493 780 ntBASIC20.34■□□□□ 0.85
Sox5P35710 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sox5P35710 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sox5P35710 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox5P35710 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox5P35710 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox5P35710 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.33■□□□□ 0.85
Sox5P35710 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.33■□□□□ 0.84
Sox5P35710 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox5P35710 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox5P35710 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox5P35710 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sox5P35710 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sox5P35710 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox5P35710 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.32■□□□□ 0.84
Sox5P35710 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox5P35710 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox5P35710 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox5P35710 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sox5P35710 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox5P35710 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms