Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.25■□□□□ 0.35
Thbs1P35441 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thbs1P35441 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Thbs1P35441 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.25■□□□□ 0.35
Thbs1P35441 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thbs1P35441 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thbs1P35441 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thbs1P35441 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Thbs1P35441 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thbs1P35441 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thbs1P35441 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Thbs1P35441 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thbs1P35441 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thbs1P35441 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thbs1P35441 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thbs1P35441 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thbs1P35441 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.24■□□□□ 0.35
Thbs1P35441 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Thbs1P35441 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thbs1P35441 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thbs1P35441 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Thbs1P35441 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.23■□□□□ 0.35
Thbs1P35441 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Thbs1P35441 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Thbs1P35441 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.23■□□□□ 0.35
Thbs1P35441 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Thbs1P35441 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.23■□□□□ 0.35
Thbs1P35441 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Thbs1P35441 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Thbs1P35441 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thbs1P35441 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thbs1P35441 Gm13146-201ENSMUST00000118508 780 ntBASIC17.22■□□□□ 0.35
Thbs1P35441 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.22■□□□□ 0.35
Thbs1P35441 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Thbs1P35441 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thbs1P35441 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Thbs1P35441 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thbs1P35441 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.22■□□□□ 0.35
Thbs1P35441 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Thbs1P35441 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Thbs1P35441 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thbs1P35441 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Thbs1P35441 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thbs1P35441 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thbs1P35441 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thbs1P35441 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thbs1P35441 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thbs1P35441 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Thbs1P35441 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.21■□□□□ 0.35
Thbs1P35441 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.21■□□□□ 0.35
Thbs1P35441 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Thbs1P35441 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thbs1P35441 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thbs1P35441 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Thbs1P35441 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Thbs1P35441 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Thbs1P35441 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thbs1P35441 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thbs1P35441 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Thbs1P35441 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.2■□□□□ 0.34
Thbs1P35441 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thbs1P35441 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thbs1P35441 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thbs1P35441 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thbs1P35441 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.2■□□□□ 0.34
Thbs1P35441 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Thbs1P35441 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.19■□□□□ 0.34
Thbs1P35441 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.19■□□□□ 0.34
Thbs1P35441 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.19■□□□□ 0.34
Thbs1P35441 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.19■□□□□ 0.34
Thbs1P35441 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Gm9988-201ENSMUST00000069786 435 ntBASIC17.19■□□□□ 0.34
Thbs1P35441 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.19■□□□□ 0.34
Thbs1P35441 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.19■□□□□ 0.34
Thbs1P35441 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Thbs1P35441 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms