Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nckap1P28660 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nckap1P28660 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nckap1P28660 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nckap1P28660 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nckap1P28660 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nckap1P28660 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nckap1P28660 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nckap1P28660 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Nckap1P28660 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.57■□□□□ 0.56
Nckap1P28660 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.57■□□□□ 0.56
Nckap1P28660 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Nckap1P28660 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nckap1P28660 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nckap1P28660 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nckap1P28660 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nckap1P28660 Gm10812-201ENSMUST00000099864 546 ntBASIC18.57■□□□□ 0.56
Nckap1P28660 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.57■□□□□ 0.56
Nckap1P28660 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nckap1P28660 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nckap1P28660 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nckap1P28660 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Nckap1P28660 Gm12896-201ENSMUST00000118430 226 ntBASIC18.56■□□□□ 0.56
Nckap1P28660 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 Gm2559-201ENSMUST00000201323 363 ntBASIC18.56■□□□□ 0.56
Nckap1P28660 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.56■□□□□ 0.56
Nckap1P28660 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nckap1P28660 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nckap1P28660 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nckap1P28660 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.55■□□□□ 0.56
Nckap1P28660 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
Nckap1P28660 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nckap1P28660 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nckap1P28660 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.55■□□□□ 0.56
Nckap1P28660 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nckap1P28660 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nckap1P28660 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nckap1P28660 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nckap1P28660 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.54■□□□□ 0.56
Nckap1P28660 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nckap1P28660 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nckap1P28660 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nckap1P28660 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.54■□□□□ 0.56
Nckap1P28660 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.54■□□□□ 0.56
Nckap1P28660 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nckap1P28660 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nckap1P28660 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nckap1P28660 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Nckap1P28660 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nckap1P28660 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nckap1P28660 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nckap1P28660 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nckap1P28660 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.53■□□□□ 0.56
Nckap1P28660 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nckap1P28660 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nckap1P28660 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nckap1P28660 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.53■□□□□ 0.56
Nckap1P28660 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nckap1P28660 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nckap1P28660 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nckap1P28660 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nckap1P28660 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nckap1P28660 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nckap1P28660 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Nckap1P28660 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nckap1P28660 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.52■□□□□ 0.56
Nckap1P28660 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nckap1P28660 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nckap1P28660 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nckap1P28660 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nckap1P28660 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.52■□□□□ 0.56
Nckap1P28660 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nckap1P28660 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nckap1P28660 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nckap1P28660 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nckap1P28660 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.52■□□□□ 0.56
Nckap1P28660 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Nckap1P28660 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nckap1P28660 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.52■□□□□ 0.55
Nckap1P28660 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Nckap1P28660 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nckap1P28660 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nckap1P28660 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Nckap1P28660 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nckap1P28660 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nckap1P28660 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nckap1P28660 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nckap1P28660 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nckap1P28660 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms