Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40P27512 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.91■□□□□ 0.3
Cd40P27512 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40P27512 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.91■□□□□ 0.3
Cd40P27512 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40P27512 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cd40P27512 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.91■□□□□ 0.3
Cd40P27512 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40P27512 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cd40P27512 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40P27512 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cd40P27512 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.9■□□□□ 0.3
Cd40P27512 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.9■□□□□ 0.3
Cd40P27512 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40P27512 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40P27512 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cd40P27512 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cd40P27512 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.9■□□□□ 0.3
Cd40P27512 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40P27512 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Cd40P27512 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40P27512 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.9■□□□□ 0.3
Cd40P27512 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.9■□□□□ 0.3
Cd40P27512 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd40P27512 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cd40P27512 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.9■□□□□ 0.3
Cd40P27512 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cd40P27512 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Cd40P27512 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.89■□□□□ 0.3
Cd40P27512 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd40P27512 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd40P27512 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cd40P27512 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Gm27405-201ENSMUST00000184201 112 ntBASIC16.89■□□□□ 0.29
Cd40P27512 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.89■□□□□ 0.29
Cd40P27512 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd40P27512 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40P27512 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40P27512 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40P27512 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cd40P27512 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40P27512 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.88■□□□□ 0.29
Cd40P27512 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40P27512 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40P27512 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40P27512 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Cd40P27512 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40P27512 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40P27512 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Cd40P27512 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd40P27512 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40P27512 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cd40P27512 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40P27512 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd40P27512 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cd40P27512 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40P27512 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40P27512 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd40P27512 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.87■□□□□ 0.29
Cd40P27512 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40P27512 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40P27512 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cd40P27512 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cd40P27512 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd40P27512 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40P27512 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40P27512 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40P27512 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd40P27512 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Cd40P27512 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cd40P27512 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.86■□□□□ 0.29
Cd40P27512 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cd40P27512 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.86■□□□□ 0.29
Cd40P27512 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cd40P27512 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cd40P27512 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd40P27512 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.86■□□□□ 0.29
Cd40P27512 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cd40P27512 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms