Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfkb1P25799 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfkb1P25799 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfkb1P25799 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfkb1P25799 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Nfkb1P25799 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nfkb1P25799 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.18■□□□□ 0.66
Nfkb1P25799 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Nfkb1P25799 Gm37856-201ENSMUST00000191634 999 ntBASIC19.18■□□□□ 0.66
Nfkb1P25799 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.18■□□□□ 0.66
Nfkb1P25799 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Nfkb1P25799 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.18■□□□□ 0.66
Nfkb1P25799 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nfkb1P25799 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfkb1P25799 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Nfkb1P25799 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.17■□□□□ 0.66
Nfkb1P25799 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfkb1P25799 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfkb1P25799 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nfkb1P25799 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfkb1P25799 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.16■□□□□ 0.66
Nfkb1P25799 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nfkb1P25799 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfkb1P25799 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfkb1P25799 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfkb1P25799 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nfkb1P25799 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfkb1P25799 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfkb1P25799 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Nfkb1P25799 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Nfkb1P25799 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfkb1P25799 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.16■□□□□ 0.66
Nfkb1P25799 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nfkb1P25799 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Nfkb1P25799 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.15■□□□□ 0.66
Nfkb1P25799 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Nfkb1P25799 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nfkb1P25799 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Golph3-202ENSMUST00000226517 2359 ntBASIC19.15■□□□□ 0.66
Nfkb1P25799 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Nfkb1P25799 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nfkb1P25799 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nfkb1P25799 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nfkb1P25799 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nfkb1P25799 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nfkb1P25799 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.14■□□□□ 0.65
Nfkb1P25799 Gm22240-201ENSMUST00000175225 82 ntBASIC19.14■□□□□ 0.65
Nfkb1P25799 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.14■□□□□ 0.65
Nfkb1P25799 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nfkb1P25799 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nfkb1P25799 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nfkb1P25799 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Nfkb1P25799 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nfkb1P25799 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.14■□□□□ 0.65
Nfkb1P25799 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nfkb1P25799 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nfkb1P25799 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nfkb1P25799 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nfkb1P25799 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
Nfkb1P25799 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nfkb1P25799 Gm8520-201ENSMUST00000186517 868 ntBASIC19.13■□□□□ 0.65
Nfkb1P25799 Trmt13-210ENSMUST00000198454 880 ntBASIC19.13■□□□□ 0.65
Nfkb1P25799 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nfkb1P25799 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nfkb1P25799 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nfkb1P25799 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.13■□□□□ 0.65
Nfkb1P25799 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nfkb1P25799 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nfkb1P25799 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Nfkb1P25799 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nfkb1P25799 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Nfkb1P25799 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nfkb1P25799 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.12■□□□□ 0.65
Nfkb1P25799 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Nfkb1P25799 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nfkb1P25799 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nfkb1P25799 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms