Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.01■□□□□ 0.63
VimP20152 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.01■□□□□ 0.63
VimP20152 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
VimP20152 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
VimP20152 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
VimP20152 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
VimP20152 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.01■□□□□ 0.63
VimP20152 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VimP20152 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
VimP20152 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
VimP20152 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VimP20152 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VimP20152 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VimP20152 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19■□□□□ 0.63
VimP20152 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19■□□□□ 0.63
VimP20152 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VimP20152 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
VimP20152 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VimP20152 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
VimP20152 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19■□□□□ 0.63
VimP20152 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
VimP20152 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
VimP20152 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
VimP20152 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
VimP20152 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VimP20152 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VimP20152 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
VimP20152 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VimP20152 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.99■□□□□ 0.63
VimP20152 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VimP20152 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.99■□□□□ 0.63
VimP20152 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.99■□□□□ 0.63
VimP20152 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
VimP20152 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
VimP20152 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
VimP20152 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.99■□□□□ 0.63
VimP20152 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.99■□□□□ 0.63
VimP20152 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VimP20152 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VimP20152 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VimP20152 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VimP20152 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.98■□□□□ 0.63
VimP20152 Gm43530-201ENSMUST00000195920 274 ntBASIC18.98■□□□□ 0.63
VimP20152 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.98■□□□□ 0.63
VimP20152 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.98■□□□□ 0.63
VimP20152 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VimP20152 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.98■□□□□ 0.63
VimP20152 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VimP20152 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
VimP20152 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
VimP20152 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VimP20152 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VimP20152 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VimP20152 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VimP20152 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VimP20152 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
VimP20152 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VimP20152 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
VimP20152 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VimP20152 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VimP20152 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
VimP20152 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
VimP20152 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VimP20152 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VimP20152 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VimP20152 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VimP20152 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VimP20152 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VimP20152 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VimP20152 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.96■□□□□ 0.63
VimP20152 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VimP20152 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VimP20152 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
VimP20152 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VimP20152 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VimP20152 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VimP20152 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
VimP20152 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VimP20152 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VimP20152 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.95■□□□□ 0.62
VimP20152 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VimP20152 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VimP20152 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.95■□□□□ 0.62
VimP20152 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VimP20152 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
VimP20152 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VimP20152 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms