Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hoxc6P10629 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.84■□□□□ 0.93
Hoxc6P10629 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc6P10629 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc6P10629 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Hoxc6P10629 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hoxc6P10629 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc6P10629 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Hoxc6P10629 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Hoxc6P10629 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
Hoxc6P10629 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc6P10629 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc6P10629 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hoxc6P10629 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc6P10629 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.83■□□□□ 0.93
Hoxc6P10629 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc6P10629 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc6P10629 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.83■□□□□ 0.93
Hoxc6P10629 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc6P10629 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc6P10629 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.83■□□□□ 0.93
Hoxc6P10629 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hoxc6P10629 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hoxc6P10629 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc6P10629 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.82■□□□□ 0.92
Hoxc6P10629 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc6P10629 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Hoxc6P10629 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc6P10629 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc6P10629 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc6P10629 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hoxc6P10629 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Hoxc6P10629 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc6P10629 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.81■□□□□ 0.92
Hoxc6P10629 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.81■□□□□ 0.92
Hoxc6P10629 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc6P10629 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Hoxc6P10629 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc6P10629 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc6P10629 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc6P10629 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Hoxc6P10629 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hoxc6P10629 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.81■□□□□ 0.92
Hoxc6P10629 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxc6P10629 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxc6P10629 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxc6P10629 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.8■□□□□ 0.92
Hoxc6P10629 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxc6P10629 Mir5122-201ENSMUST00000175004 89 ntBASIC20.8■□□□□ 0.92
Hoxc6P10629 Flg-201ENSMUST00000050758 1488 ntBASIC20.8■□□□□ 0.92
Hoxc6P10629 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Hoxc6P10629 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Hoxc6P10629 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc6P10629 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.79■□□□□ 0.92
Hoxc6P10629 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Hoxc6P10629 Gm11927-201ENSMUST00000118472 759 ntBASIC20.79■□□□□ 0.92
Hoxc6P10629 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.79■□□□□ 0.92
Hoxc6P10629 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc6P10629 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc6P10629 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc6P10629 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc6P10629 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Hoxc6P10629 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.78■□□□□ 0.92
Hoxc6P10629 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc6P10629 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc6P10629 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc6P10629 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc6P10629 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc6P10629 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc6P10629 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc6P10629 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc6P10629 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hoxc6P10629 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Hoxc6P10629 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Hoxc6P10629 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Hoxc6P10629 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Hoxc6P10629 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc6P10629 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.77■□□□□ 0.92
Hoxc6P10629 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.77■□□□□ 0.92
Hoxc6P10629 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Hoxc6P10629 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc6P10629 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc6P10629 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.77■□□□□ 0.92
Hoxc6P10629 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc6P10629 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc6P10629 Gm9987-201ENSMUST00000069768 567 ntBASIC20.77■□□□□ 0.92
Hoxc6P10629 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc6P10629 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc6P10629 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hoxc6P10629 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Hoxc6P10629 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Hoxc6P10629 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc6P10629 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc6P10629 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc6P10629 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc6P10629 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc6P10629 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc6P10629 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc6P10629 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hoxc6P10629 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms