Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.04■□□□□ 0.96
Surf1P09925 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Surf1P09925 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Surf1P09925 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Surf1P09925 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Surf1P09925 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Surf1P09925 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Surf1P09925 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Surf1P09925 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Surf1P09925 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Surf1P09925 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Surf1P09925 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Surf1P09925 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Surf1P09925 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Surf1P09925 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Surf1P09925 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Surf1P09925 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Surf1P09925 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Surf1P09925 Gm27405-201ENSMUST00000184201 112 ntBASIC21.03■□□□□ 0.96
Surf1P09925 Gm38205-201ENSMUST00000192243 258 ntBASIC21.03■□□□□ 0.96
Surf1P09925 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Surf1P09925 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.03■□□□□ 0.96
Surf1P09925 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Surf1P09925 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Surf1P09925 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Surf1P09925 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.03■□□□□ 0.96
Surf1P09925 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Surf1P09925 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Surf1P09925 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Surf1P09925 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.02■□□□□ 0.96
Surf1P09925 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Surf1P09925 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
Surf1P09925 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Surf1P09925 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Surf1P09925 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Surf1P09925 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.02■□□□□ 0.96
Surf1P09925 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Surf1P09925 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.02■□□□□ 0.96
Surf1P09925 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.02■□□□□ 0.96
Surf1P09925 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Surf1P09925 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Surf1P09925 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Surf1P09925 Gm45606-201ENSMUST00000209836 2795 ntBASIC21.02■□□□□ 0.95
Surf1P09925 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Surf1P09925 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Surf1P09925 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Surf1P09925 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.01■□□□□ 0.95
Surf1P09925 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Gm7860-201ENSMUST00000121190 879 ntBASIC21.01■□□□□ 0.95
Surf1P09925 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Gm7291-201ENSMUST00000199147 382 ntBASIC21.01■□□□□ 0.95
Surf1P09925 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Surf1P09925 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Surf1P09925 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Surf1P09925 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21■□□□□ 0.95
Surf1P09925 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21■□□□□ 0.95
Surf1P09925 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21■□□□□ 0.95
Surf1P09925 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Surf1P09925 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Surf1P09925 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Surf1P09925 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Surf1P09925 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Surf1P09925 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Surf1P09925 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.99■□□□□ 0.95
Surf1P09925 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Surf1P09925 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.99■□□□□ 0.95
Surf1P09925 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Surf1P09925 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.99■□□□□ 0.95
Surf1P09925 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Surf1P09925 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Surf1P09925 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Surf1P09925 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Surf1P09925 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Surf1P09925 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms