Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa4P06798 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa4P06798 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.42■□□□□ 0.54
Hoxa4P06798 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.42■□□□□ 0.54
Hoxa4P06798 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hoxa4P06798 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hoxa4P06798 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa4P06798 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa4P06798 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxa4P06798 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hoxa4P06798 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa4P06798 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Hoxa4P06798 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa4P06798 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.41■□□□□ 0.54
Hoxa4P06798 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa4P06798 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.41■□□□□ 0.54
Hoxa4P06798 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa4P06798 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa4P06798 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa4P06798 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxa4P06798 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxa4P06798 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxa4P06798 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Hoxa4P06798 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.4■□□□□ 0.54
Hoxa4P06798 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hoxa4P06798 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Hoxa4P06798 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.4■□□□□ 0.54
Hoxa4P06798 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hoxa4P06798 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxa4P06798 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hoxa4P06798 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hoxa4P06798 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hoxa4P06798 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa4P06798 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa4P06798 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Hoxa4P06798 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa4P06798 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa4P06798 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Hoxa4P06798 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa4P06798 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa4P06798 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa4P06798 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa4P06798 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa4P06798 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa4P06798 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxa4P06798 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa4P06798 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.38■□□□□ 0.53
Hoxa4P06798 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.38■□□□□ 0.53
Hoxa4P06798 Gm26524-201ENSMUST00000192339 390 ntBASIC18.38■□□□□ 0.53
Hoxa4P06798 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.38■□□□□ 0.53
Hoxa4P06798 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa4P06798 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.38■□□□□ 0.53
Hoxa4P06798 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa4P06798 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa4P06798 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa4P06798 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa4P06798 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxa4P06798 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa4P06798 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa4P06798 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.37■□□□□ 0.53
Hoxa4P06798 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.37■□□□□ 0.53
Hoxa4P06798 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa4P06798 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa4P06798 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa4P06798 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa4P06798 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxa4P06798 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hoxa4P06798 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
Hoxa4P06798 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Hoxa4P06798 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.36■□□□□ 0.53
Hoxa4P06798 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.36■□□□□ 0.53
Hoxa4P06798 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.36■□□□□ 0.53
Hoxa4P06798 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.36■□□□□ 0.53
Hoxa4P06798 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxa4P06798 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Hoxa4P06798 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa4P06798 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa4P06798 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa4P06798 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa4P06798 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.35■□□□□ 0.53
Hoxa4P06798 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.35■□□□□ 0.53
Hoxa4P06798 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa4P06798 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa4P06798 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.35■□□□□ 0.53
Hoxa4P06798 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa4P06798 Gm22325-201ENSMUST00000158904 308 ntBASIC18.35■□□□□ 0.53
Hoxa4P06798 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxa4P06798 Gm4968-201ENSMUST00000071458 858 ntBASIC18.35■□□□□ 0.53
Hoxa4P06798 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms