Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
P06320 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P06320 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
P06320 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC11.83□□□□□ -0.52
P06320 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P06320 Gm45640-201ENSMUST00000210665 1896 ntBASIC11.83□□□□□ -0.52
P06320 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Gm11175-201ENSMUST00000116172 543 ntBASIC11.83□□□□□ -0.52
P06320 Gm45444-201ENSMUST00000211394 898 ntBASIC11.83□□□□□ -0.52
P06320 AC124603.1-201ENSMUST00000223843 308 ntBASIC11.83□□□□□ -0.52
P06320 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC11.83□□□□□ -0.52
P06320 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC11.83□□□□□ -0.52
P06320 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P06320 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.83□□□□□ -0.52
P06320 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
P06320 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC11.83□□□□□ -0.52
P06320 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P06320 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
P06320 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC11.82□□□□□ -0.52
P06320 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC11.82□□□□□ -0.52
P06320 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P06320 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06320 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
P06320 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
P06320 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
P06320 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC11.81□□□□□ -0.52
P06320 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC11.81□□□□□ -0.52
P06320 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC11.81□□□□□ -0.52
P06320 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06320 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
P06320 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC11.8□□□□□ -0.52
P06320 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
P06320 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Gm5953-201ENSMUST00000220644 2616 ntBASIC11.8□□□□□ -0.52
P06320 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
P06320 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06320 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P06320 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms