Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04224 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
P04224 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04224 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04224 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04224 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04224 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04224 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04224 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04224 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04224 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04224 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04224 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P04224 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
P04224 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P04224 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P04224 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P04224 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.37■□□□□ 0.21
P04224 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
P04224 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04224 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04224 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
P04224 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
P04224 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.36■□□□□ 0.21
P04224 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.36■□□□□ 0.21
P04224 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
P04224 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.36■□□□□ 0.21
P04224 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
P04224 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
P04224 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04224 Etf1-202ENSMUST00000180351 108 ntBASIC16.36■□□□□ 0.21
P04224 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
P04224 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04224 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04224 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.36■□□□□ 0.21
P04224 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.36■□□□□ 0.21
P04224 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.35■□□□□ 0.21
P04224 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.35■□□□□ 0.21
P04224 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P04224 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.34■□□□□ 0.21
P04224 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Gm7417-201ENSMUST00000192950 473 ntBASIC16.34■□□□□ 0.21
P04224 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.34■□□□□ 0.21
P04224 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.34■□□□□ 0.21
P04224 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
P04224 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04224 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
P04224 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04224 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.33■□□□□ 0.21
P04224 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
P04224 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04224 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04224 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.33■□□□□ 0.2
P04224 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04224 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04224 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04224 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04224 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04224 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04224 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04224 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04224 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04224 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04224 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.32■□□□□ 0.2
P04224 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
P04224 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04224 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04224 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
P04224 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04224 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.32■□□□□ 0.2
P04224 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04224 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04224 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04224 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04224 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms