Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TcraP01849 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.64□□□□□ -0.23
TcraP01849 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.64□□□□□ -0.23
TcraP01849 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.64□□□□□ -0.23
TcraP01849 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TcraP01849 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.63□□□□□ -0.23
TcraP01849 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TcraP01849 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TcraP01849 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.63□□□□□ -0.23
TcraP01849 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.63□□□□□ -0.23
TcraP01849 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TcraP01849 Mir6236-201ENSMUST00000184437 123 ntBASIC13.63□□□□□ -0.23
TcraP01849 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.63□□□□□ -0.23
TcraP01849 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TcraP01849 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TcraP01849 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TcraP01849 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.63□□□□□ -0.23
TcraP01849 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TcraP01849 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TcraP01849 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TcraP01849 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TcraP01849 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TcraP01849 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TcraP01849 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.63□□□□□ -0.23
TcraP01849 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TcraP01849 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TcraP01849 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TcraP01849 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TcraP01849 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TcraP01849 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Gm15820-201ENSMUST00000201566 728 ntBASIC13.62□□□□□ -0.23
TcraP01849 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TcraP01849 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TcraP01849 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC13.61□□□□□ -0.23
TcraP01849 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
TcraP01849 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TcraP01849 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
TcraP01849 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TcraP01849 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TcraP01849 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TcraP01849 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TcraP01849 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TcraP01849 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms