Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.17□□□□□ -0.3
Sh2d1aO88890 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sh2d1aO88890 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Sh2d1aO88890 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sh2d1aO88890 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Sh2d1aO88890 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.15□□□□□ -0.31
Sh2d1aO88890 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Sh2d1aO88890 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Gm27801-201ENSMUST00000184174 223 ntBASIC13.14□□□□□ -0.31
Sh2d1aO88890 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sh2d1aO88890 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.14□□□□□ -0.31
Sh2d1aO88890 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sh2d1aO88890 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms