Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ShdO88834 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.11■□□□□ 0.65
ShdO88834 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
ShdO88834 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ShdO88834 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShdO88834 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ShdO88834 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShdO88834 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ShdO88834 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShdO88834 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ShdO88834 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShdO88834 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShdO88834 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShdO88834 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShdO88834 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ShdO88834 Gm13534-201ENSMUST00000121169 513 ntBASIC19.1■□□□□ 0.65
ShdO88834 Gm26571-201ENSMUST00000181399 666 ntBASIC19.1■□□□□ 0.65
ShdO88834 Gm10033-202ENSMUST00000211874 928 ntBASIC19.1■□□□□ 0.65
ShdO88834 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.1■□□□□ 0.65
ShdO88834 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ShdO88834 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.1■□□□□ 0.65
ShdO88834 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShdO88834 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShdO88834 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.09■□□□□ 0.65
ShdO88834 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ShdO88834 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ShdO88834 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShdO88834 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.09■□□□□ 0.65
ShdO88834 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ShdO88834 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShdO88834 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ShdO88834 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShdO88834 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShdO88834 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShdO88834 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ShdO88834 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ShdO88834 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ShdO88834 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ShdO88834 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ShdO88834 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ShdO88834 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.08■□□□□ 0.64
ShdO88834 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.08■□□□□ 0.64
ShdO88834 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.08■□□□□ 0.64
ShdO88834 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
ShdO88834 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShdO88834 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShdO88834 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.08■□□□□ 0.64
ShdO88834 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShdO88834 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShdO88834 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.08■□□□□ 0.64
ShdO88834 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ShdO88834 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShdO88834 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ShdO88834 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.08■□□□□ 0.64
ShdO88834 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ShdO88834 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.07■□□□□ 0.64
ShdO88834 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.07■□□□□ 0.64
ShdO88834 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.07■□□□□ 0.64
ShdO88834 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ShdO88834 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.06■□□□□ 0.64
ShdO88834 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.06■□□□□ 0.64
ShdO88834 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.06■□□□□ 0.64
ShdO88834 Gm18671-201ENSMUST00000214826 683 ntBASIC19.06■□□□□ 0.64
ShdO88834 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
ShdO88834 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ShdO88834 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShdO88834 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShdO88834 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShdO88834 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
ShdO88834 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShdO88834 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.05■□□□□ 0.64
ShdO88834 Gm42569-201ENSMUST00000200539 472 ntBASIC19.05■□□□□ 0.64
ShdO88834 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShdO88834 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShdO88834 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShdO88834 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ShdO88834 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms