Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Dnmt3aO88508 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnmt3aO88508 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnmt3aO88508 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnmt3aO88508 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Dnmt3aO88508 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.68■□□□□ 0.58
Dnmt3aO88508 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Dnmt3aO88508 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.68■□□□□ 0.58
Dnmt3aO88508 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnmt3aO88508 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnmt3aO88508 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Dnmt3aO88508 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Dnmt3aO88508 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3aO88508 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3aO88508 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3aO88508 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3aO88508 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.67■□□□□ 0.58
Dnmt3aO88508 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3aO88508 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3aO88508 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3aO88508 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Dnmt3aO88508 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Dnmt3aO88508 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.65■□□□□ 0.58
Dnmt3aO88508 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Dnmt3aO88508 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Dnmt3aO88508 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3aO88508 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3aO88508 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.64■□□□□ 0.57
Dnmt3aO88508 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.64■□□□□ 0.57
Dnmt3aO88508 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3aO88508 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3aO88508 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3aO88508 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3aO88508 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3aO88508 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.64■□□□□ 0.57
Dnmt3aO88508 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Dnmt3aO88508 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Dnmt3aO88508 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3aO88508 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Dnmt3aO88508 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.63■□□□□ 0.57
Dnmt3aO88508 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Dnmt3aO88508 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3aO88508 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3aO88508 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3aO88508 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3aO88508 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.62■□□□□ 0.57
Dnmt3aO88508 Gm6420-201ENSMUST00000193885 723 ntBASIC18.62■□□□□ 0.57
Dnmt3aO88508 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Dnmt3aO88508 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3aO88508 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3aO88508 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3aO88508 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Dnmt3aO88508 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Dnmt3aO88508 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.61■□□□□ 0.57
Dnmt3aO88508 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Dnmt3aO88508 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnmt3aO88508 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnmt3aO88508 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Dnmt3aO88508 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Dnmt3aO88508 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.61■□□□□ 0.57
Dnmt3aO88508 Gm37179-201ENSMUST00000194862 823 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms