Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1hO88427 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1hO88427 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cacna1hO88427 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1hO88427 Gm11927-201ENSMUST00000118472 759 ntBASIC18.27■□□□□ 0.52
Cacna1hO88427 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.27■□□□□ 0.52
Cacna1hO88427 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.27■□□□□ 0.52
Cacna1hO88427 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.27■□□□□ 0.52
Cacna1hO88427 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.27■□□□□ 0.52
Cacna1hO88427 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1hO88427 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1hO88427 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1hO88427 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cacna1hO88427 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.27■□□□□ 0.52
Cacna1hO88427 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.27■□□□□ 0.52
Cacna1hO88427 Gm22697-201ENSMUST00000175194 63 ntBASIC18.27■□□□□ 0.52
Cacna1hO88427 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cacna1hO88427 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cacna1hO88427 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.27■□□□□ 0.51
Cacna1hO88427 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.27■□□□□ 0.51
Cacna1hO88427 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.27■□□□□ 0.51
Cacna1hO88427 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.26■□□□□ 0.51
Cacna1hO88427 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1hO88427 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1hO88427 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Cacna1hO88427 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1hO88427 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1hO88427 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1hO88427 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.26■□□□□ 0.51
Cacna1hO88427 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.26■□□□□ 0.51
Cacna1hO88427 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1hO88427 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cacna1hO88427 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.25■□□□□ 0.51
Cacna1hO88427 Gm5587-201ENSMUST00000206270 674 ntBASIC18.25■□□□□ 0.51
Cacna1hO88427 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cacna1hO88427 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Cacna1hO88427 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.25■□□□□ 0.51
Cacna1hO88427 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Cacna1hO88427 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cacna1hO88427 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1hO88427 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1hO88427 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1hO88427 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.24■□□□□ 0.51
Cacna1hO88427 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1hO88427 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1hO88427 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cacna1hO88427 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cacna1hO88427 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Cacna1hO88427 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1hO88427 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1hO88427 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.24■□□□□ 0.51
Cacna1hO88427 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.24■□□□□ 0.51
Cacna1hO88427 Mtag2-201ENSMUST00000058665 714 ntBASIC18.24■□□□□ 0.51
Cacna1hO88427 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1hO88427 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cacna1hO88427 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1hO88427 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1hO88427 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1hO88427 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.23■□□□□ 0.51
Cacna1hO88427 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1hO88427 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1hO88427 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cacna1hO88427 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1hO88427 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1hO88427 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.23■□□□□ 0.51
Cacna1hO88427 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1hO88427 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cacna1hO88427 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cacna1hO88427 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Cacna1hO88427 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.22■□□□□ 0.51
Cacna1hO88427 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1hO88427 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cacna1hO88427 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1hO88427 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1hO88427 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.22■□□□□ 0.51
Cacna1hO88427 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1hO88427 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cacna1hO88427 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1hO88427 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cacna1hO88427 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1hO88427 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1hO88427 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cacna1hO88427 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cacna1hO88427 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.22■□□□□ 0.51
Cacna1hO88427 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms