Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim1O70400 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim1O70400 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.43■□□□□ 0.54
Pdlim1O70400 Gm6365-201ENSMUST00000054711 744 ntBASIC18.43■□□□□ 0.54
Pdlim1O70400 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim1O70400 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim1O70400 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim1O70400 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Pdlim1O70400 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim1O70400 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Pdlim1O70400 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pdlim1O70400 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pdlim1O70400 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pdlim1O70400 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pdlim1O70400 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.42■□□□□ 0.54
Pdlim1O70400 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pdlim1O70400 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.42■□□□□ 0.54
Pdlim1O70400 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pdlim1O70400 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pdlim1O70400 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.41■□□□□ 0.54
Pdlim1O70400 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Pdlim1O70400 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pdlim1O70400 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim1O70400 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.4■□□□□ 0.54
Pdlim1O70400 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pdlim1O70400 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim1O70400 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.4■□□□□ 0.54
Pdlim1O70400 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim1O70400 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.4■□□□□ 0.54
Pdlim1O70400 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pdlim1O70400 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pdlim1O70400 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Pdlim1O70400 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim1O70400 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim1O70400 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.39■□□□□ 0.53
Pdlim1O70400 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim1O70400 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim1O70400 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim1O70400 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim1O70400 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pdlim1O70400 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pdlim1O70400 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim1O70400 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim1O70400 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pdlim1O70400 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.38■□□□□ 0.53
Pdlim1O70400 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.38■□□□□ 0.53
Pdlim1O70400 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim1O70400 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pdlim1O70400 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.37■□□□□ 0.53
Pdlim1O70400 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pdlim1O70400 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.37■□□□□ 0.53
Pdlim1O70400 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.37■□□□□ 0.53
Pdlim1O70400 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.37■□□□□ 0.53
Pdlim1O70400 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pdlim1O70400 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.36■□□□□ 0.53
Pdlim1O70400 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim1O70400 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim1O70400 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim1O70400 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim1O70400 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pdlim1O70400 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.36■□□□□ 0.53
Pdlim1O70400 Mir5133-201ENSMUST00000174955 77 ntBASIC18.36■□□□□ 0.53
Pdlim1O70400 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.36■□□□□ 0.53
Pdlim1O70400 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms